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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49481784, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELALKMKR LLLVGTITLS MLCTESLMNY HTVEAKVKKV ERMPKNVIIM VMDGTSSTAT  60
   61 TLARLYKGKA LALDEIVTGG VRTYSAESAI TDSAPAATAL ATGNKSNSGY VGVLPSIVSS 120
  121 PGLKPMKEED KLRPVANVLE GAKRTGRATG IVATAEIQHA TPAGFSAHHV NRNNFEVLAE 180
  181 QQVYQNIDVV LGGGKAALLP VTNSGIRKDG EDLVKVIQNK GYDFVETKEA LLGSKSNKIW 240
  241 GSFSHNALAF DMDREATTPE QPTLSQMTEK AIQTLSKDKD GFFLFVEGSK PDWAAHVNDP 300
  301 IGMISDVLAF DNAVAEALKF AKKDGNTMLI AVADHGNSGI SIGNMNTTKG YNTTPVSAYI 360
  361 DPLKKAKMTL EGTINNLKAD ISNVEEVAKL YGLDNLTYDE KERLKTAKKK IDVGPIFTTL 420
  421 LSKRANIGFT TGGHTGEDVF LYSYGPQKPY GLIQNTDVAK TLAKAMGFNL EKVTNKLFVE 480
  481 SESAFKQNDA AVTIDKTDVA NPVLIVKRNN VTAQLFVNKN IIRIKNKEYE LGSVVVESNG 540
  541 KVYVPEEAIH LFRKHSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle