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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49481699, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWVKVTLS IAGGIVLVAC AGGYYVYKNY FPKEPERIVY DKERVLQPIH NQLKGINIEN  60
   61 VKIKEKEVVN ATVDALQKMI DDGKLSYEEL TSIYLFRIQE HDQNGITLNS VTEINPNAME 120
  121 EARKLDQERG RNKKSNLYGI PVVVKDNVQT AKVMPTSAGT YVLKDWIADQ DATIVKQLKE 180
  181 DGAFVLGKAN MSEWANYLSF TMPSGYSGKK GQNLNPYDPI TFDTSGSSSG SATVVTADFA 240
  241 PLAVGTETTG SIVAPAAQQS VVGLRPSLGL VSRTGIIPLA ETLDTAGPMA RTVKDAATLF 300
  301 NAMIGYDEKD VMTEKVKDKE RIDYTKDLSI DGLKGKKIGL LFSVDQQDEN RKAVAEKIRK 360
  361 DLQDAGAILT DYIQLNNGGV DNLQTLEYEF KHNVNDYFSQ QKNVPVKSLE EIIAFNKKDS 420
  421 KRRIKYGQTL IEESEKSAIT KDEFEKVVQT SQENAKKELD RYLVEKGLDA LVMINNEEVL 480
  481 LSAVAGYPEL AVPAGYDNNG EPVGAVFVGK QFGEKELFNI GYAYEQQSKN RKPPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle