YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261677, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLLVDGM ALLFRAFYAT SVYGQFMKRQ DGTPTNGIHG YMKHLLTAMQ AIEPTHIVTC  60
   61 WDMGSTTFRT ESFSNYKANR AAPPEELIPQ FDLVQEMTAK LSVPVIGMKG YEADDCIGTL 120
  121 AKQYCNEAEV YILTGDTDLL QLVDKNVTVM LLRKGMGNYE YYTPEKIMEE KGVEPWQIVH 180
  181 AKAFMGDTSD NYPGVKGIGE KTAYKLIQEH GTVATVLENV ASLTKAQRTK IESDLENLNI 240
  241 SLQLAQIHCE VPISCSLEEG LHTIDEEKLR FVCEEMNWGR PEMLINML

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	288	0.99