YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30258874, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLSISFA LILIVSMFSA CSNGEEKATG KNKKVLVMGT SADYKPYEYV EASKSDEIIG  60
   61 FDVDVAKYIG KELGYEVKVK DMDFGGLLAS LSSGKVDFVM AGMTPTAERK NNVDFTDIYF 120
  121 VAKNMVVSKK DSNIKSVEDL KGKKVGVQTG SIQEEKAAEF KKQVDFKVEG RDRIPEIVQE 180
  181 IKAGRFDAAI IEDTVAKNYL EKMKDLQGIE IKEAPEEVGA AIALPKNSDK TAEFNKVIKK 240
  241 MQENGEMDKL VKKWFGSEK

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	259	0.99