YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118476857, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPFKVLS SIALTAVLGL SFGAGGQSVY AETPVNKTAT SPVDDHLIPE ERLADALKKR  60
   61 GVIDSKASEK ETKKAVEKYV ENKKGENPGK EVTNGDPLTK EASDFLKKVK DAKADTKEKL 120
  121 DKPATGTPAA TGPVRGGLNG KVPTSPAKQK AYNGDVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSEDFNK EHYEKMLFGD EPFTLDDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVPG 240
  241 KAADYGADAA TGHDNKGPKG PRDLVKDALK AAVDSGLDLS EFDQFDQYDV NGDGNKNQPD 300
  301 GLIDHLMIIH AGVGQEAGGG KLGDDAIWSH RWTVGPKPFP IEGTQAKVPY WGGKMAAFDY 360
  361 TIEPEDGAVG VFAHEYGHDL GLPDEYDTQY SGHGEPVQAW SIMSGGSWAG KIAGTTPTSF 420
  421 SPQNKEFFQK TIGGNWANIV EVDYEKLNKG IGLATYLDQS VTKTNRPGMI RVNLPDKDIK 480
  481 TIDPAFGKQY YYSTKGDDLH TKLETPLFDL TNATTAKFDF KSLYEIEAEY DFLEVHAVTE 540
  541 DGQQTLIERL GEKANNGNAD STNGKWIDKS YDLSQFKGKK VKLTFDYITD GGLALNGFLL 600
  601 DNASLTVDGK VVFSDDAEGT PQFKLDGFAV SNGTEKKSHN YYVEWRNYAG SDNALKFARG 660
  661 PEYNTGMVVW YADSAYTDNW VGVHPGHGFL GVVDSHPEAI VGTLNGKPTV ESSTRFQIAD 720
  721 AAFSFDKTPA WKVVSPTRGT YTYNGLAGVP KFDDSKTYIN QQIPDAGRIL PNLGLKFEVV 780
  781 GQADDNSAGA VRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle