YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49480302, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIFLCFFI IILIFQSGCT EAHIVDTQRM IHVGGFDITK NKKFRGTILY PDYTKGVQSK  60
   61 PETQSTHAGT IETISSLLNA KSPHTIAVGQ MRVVLFGKAF GEHGLGDVIN NLQRDPNIGR 120
  121 DVQLALVDGS SEELLKHVRT NGSLYLSELL EQNIKTETIP RTALNIFLYN FYSSGCDPFL 180
  181 PYIQVSEDKS ASIKGLAFLK KDKVAMYTDR KRSFLFKLLI NPTKNGRYEV PIRQGKHKGV 240
  241 IATQNLSGNS VCSLSSNGDI PKVNIHLKLN GLVKNAPRWL DLSKGKNVTY VKRHIEKMLE 300
  301 KDLNELIKQF QENKIDPIGI REEIRSHSRK WSMKQIQDMY PNVDIAVNVK INVVQSGIGE 360
  361

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	360	0.99