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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49480077, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGDIILKKK YMKALVVATT LAIPFAAYST PALAAIKIEA NQSVAASDRT YDTEIKIYKD  60
   61 QTDEPSMVSQ YIKDPKVAIV AGKKIVTVTM QDSDYFQYLR IEDRNQPGVF HDVKVLSEDK 120
  121 RKNGTKVIQF EIGEFEKKHN MQMHILIPAI GYDHKYQVQF EIKDPTVGDK ETEKPDDNSN 180
  181 SGNTETDKPV DNQNMITDNK LRELVNKKVF NRKDVNTPIT KEELLQVKNL FLNTNEILDY 240
  241 SALKYMPNLK SLTVANAKIK DPSFFANLKQ LNHLALRGNE FSDVTPLVKM DHLDSLDLSN 300
  301 NKITNVAPLI EMKNVKSLYL SGNQIEDVTA LAKMEQLDYL NLANNKITNV APLSALKNVT 360
  361 YLTLAGNQIE DIKPLYSLPL TDLVLTRNKV KDLSGIEQMK QLEELWIGKN EIKDVTPLSK 420
  421 MTQLKQLHLP NNELKDITPL SSLVNLQKLD LEANYISDLT PASNLKKLVF LSFVANEIRD 480
  481 VRPVIELSKT AYINVQNQKV FLEETEVNKE VKVPIYEKDG KISTKIRLKD EGGTYSNDAV 540
  541 KWSTPGEKVY EFGVKDPFAD TGIFFTGSVI QNVVESKADN TSKEDAKVEV VEFKDVPKGH 600
  601 WSEEAIHYLA KENIFKGYGN GQFGFGDSIT RGQVASLVQR YLKLENKVEQ KERFTDTKGH 660
  661 MFEQDIATVA QAGIMQGDGT GEFRPDGVLT RYEMSVVLYK VFQLKEDGNN KVNFKDVPTG 720
  721 HWAEGYVKAL VDNNISKGDG KERFLGDDFV TREQYAQFLY NAITK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle