YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49331364, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSERLKEE REKRNWSQSD LAEKIHVSRQ SVSKWETGKN YPSIEIIIHL SDLFGITIDE  60
   61 LLSSDEELTQ KVIEDSKQLA YPKWKVFFDS LFMVGIFLFL TKIVVWTLNK FAGASITILA 120
  121 DAPYVMSFLP FILMVIGGTA SDKLKKIYK

Type	Start	End	Confidence
Cytoplasmic	1	85	0.99
Transmembrane Helix	86	106	0.93
Non-Cytoplasmic	107	117	0.78
Transmembrane Helix	118	140	0.85
Cytoplasmic	141	149	0.90