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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49331123, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKWQSKEQL IQLLSGLVEI PSITGTEAEV ILPDFVVEQL SDLQYFKENP HHLQKNPTGD  60
   61 GRYFVTALVK KSDSTKNTVI LVSHFDVVDV QDYGVWKEDA FNPKKLTSMF YSHKDELPAH 120
  121 VREDIEQGDW LFGRGTMDMK CGLALQMAMI EQACEGRFDG NVLLLAVPDE EVNSVGMRAA 180
  181 VPRLLDLARE HDLDYKTVLN SEPMFSRHPG DQKKYIYTGS IGKVLPGFLC YGKETHVGEP 240
  241 FAGLNGSYMA SLITAELELN TDLCDIVEGE ASPPPTNLLQ RDLKEDYSVQ IPHRAVTLFN 300
  301 LFLLEKSMTD VVSLLRQKVT KVAEKIEESY EKQAYRFSKY NPFIPPNLKV NVLTYEELIA 360
  361 YAIEQHGQEK IDDIQSSIIK NREDKDDRAV TIDLVDKLAI LCKEKAPMIV LFFAPPYYPA 420
  421 VSSRNNKLIK EVVGEMERYA HFNHNITFEN QNYFGGISDL SYVGLQNPLH SMSSLVDNMP 480
  481 LWDKGYSIPL QELEEFDVPV LNMGPVGKDA HQWTERLDVN YAFETLLDML PICIKKLLVS 540
  541 NKITQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle