YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49330991, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKVFAMST TVVLAAGVLS GCGTKESSAN KNADTKKGYV PKTLNVQFVP SQNADTLEAK  60
   61 AKPLEKLLSD KLNIPVKVSI STNYNTIVEA MASKQVDVGF LPPTAYVLAH EKNAANVILQ 120
  121 AQRFGVDDET GAPTKDLVDF YKSEFVVKKD SNINSVKDLK DKKIGYQDVT SSAGYVWPAA 180
  181 VLLKEGVDPL KDVKPVTLKG HDQSLIALLN GDVDAAVVFQ DARNIVKKDY PNIFDQTKIV 240
  241 KFTEKIPNDT ISVRSDLDEE WSKKLQDAFI EIGKDEEGHK IIKEVYSHEG YVKSDDSKFD 300
  301 IVREYGKKVK TQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	312	0.99