YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228931529, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTIIIVGI LALIFIFLVF GVSSKPLRFI GKALFHITLG VALLFIVNVV GTYFDFHIPI  60
   61 NLGTATITSL LGLPGVAALV VIKLYIMPR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.92
Transmembrane Helix	5	24	0.94
Cytoplasmic	25	32	0.86
Transmembrane Helix	33	54	0.92
Non-Cytoplasmic	55	63	0.75
Transmembrane Helix	64	86	0.91
Cytoplasmic	87	89	0.88