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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49330721, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQITKRLINK TVLLLTLIVM LSSVFSFQNV KAVSNSKTTE VIIHYKEQSG NTKDWNLWIW  60
   61 GENSNGKSYE FTGEDEFGKY AKINIDGDYN RLGFIIRTNE WEKDGGDRWI ENIKDGRAEV 120
  121 WILSSDEKVY NSKPSSDLSI QKATIDSFHE ITVTTNVPFY IKEKKIEMEG IKIKSISPYD 180
  181 INSGDITNKV KIITEQKIDL KQTYKVKIEN LADTNTEIGK VIRTEEFDKL FYYGGNDLGN 240
  241 IYTPQHTKFR VWAPTASEAK LVTYKKWNDK IGTEINMQQG EKGTWKAELK GNQKGLYYTY 300
  301 KVKIGDKWTE AVDPYARAAS VNGDKGAVVD LEETNPKRWN TNKKPKLKNP EDAIIYELHV 360
  361 RDLSIQPESG IKQKGKYLGV TEKGTKGPEG VKTGLDHMKD LGVTHVQLLP IFDYASVNEE 420
  421 KVNEPQYNWG YDPKNFNVPE GSYSTNPYEP TVRITELKQM IQTLHDNNLR VVMDVVYNHM 480
  481 YNAAESNFHK LVPGYYYRYN EDGTFANGTG VGNDTASERK MMRKFMIDSV TYWAKEYNLD 540
  541 GFRFDLMGIH DYETMNEIRK AVNQIDPSII LHGEGWNLNT PLAAELKANQ KNAEKMKGIA 600
  601 HFNDNIRDGL KGSVFEEKEN GFVNGKENME DRIKKGITAG IDYDRNTSTY QDPEQVLTYV 660
  661 EAHDNHTLWD KLELTNPGDS EEARKQMHKL SSSILLTSQG IPFLHAGQEF MRTKYGDHNS 720
  721 YKSPDSINQM DWLRRAAFNN EVDYMKGLIE LRKKYPAFRM TSAEQIKTHV SFIDAPKNTV 780
  781 AYTIEGNKNE YFTVAHNANK EAGEITLPSK GPWKVLVDGK QAGSKPLYVV HDNKIKVPAL 840
  841 SSLVLKTEKP IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle