YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30262760, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAIPYVVEQ TKLGERSYDI YSRLLKDRIV IIGSEINDQV ASSVVAQLLF LEAEDAEKDI  60
   61 FLYINSPGGS TTAGFAILDT MNLIKPDVQT LCMGFAASFG ALLLLSGAKG KRFALPNSEI 120
  121 MIHQPLGGAQ GQATEIEITA KRILKLKHDI NKMIAEKTGQ PIERVAHDTE RDYFMTAEEA 180
  181 KAYGIVDDVV TKK

Type	Start	End	Confidence
Cytoplasmic	1	59	0.56
Transmembrane Helix	60	78	0.39
Non-Cytoplasmic	79	89	0.66
Transmembrane Helix	90	108	0.63
Cytoplasmic	109	193	0.49