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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49478852, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKMAGKWF SFLSALIILL GIAMPQAKAE VMNRETYKMD WSYSNSKQRE IKTEIIKTAS  60
   61 GSIAYCLTPD LRSPNGEDLP EMGKTSDAVY RVLLNGYPQK SPSELGVATT EEAHYATQLA 120
  121 VWIAANELTE EDLVAKNEHV HNLMKRLVEA SKKETGSQDV FFKVNPVDLQ TATQKGDYLE 180
  181 TGFYAVQTNA VSGSYTILPE NAPKGLRIVN ENGEEKSTLS INEKFKILIP KNTSSGNFKM 240
  241 KVKSTLTNLQ AIAFKGSEKV QNTTVLLQRN SEKISTDLVV NWESVGSLKI MKLGEKKEVL 300
  301 KGAVFEVSNE NFKQNVTTND KGIAELGNLP IGIYSVKEIQ APAGYVLDGS VKKIEVKTGE 360
  361 TAVLELKNEN VKGELEITKV DVADGNTKLP NAEFTIYNEQ GKEVVKGKTD EKGVAKFKLP 420
  421 YGKYTYKETI APNGYVINEE TFAFEIKENG EIIKHIVQDK KVEGELEITK VDVADGNTKL 480
  481 PNAEFTIYNE QGKEVVKGKT DEKGVAKFKL PYGKYTYKET IAPNGYVINE ETFAFEIKEN 540
  541 GEIIKHIVQD KKVEGELEIT KVDVADGNTK LPNAEFTIYN EQGKEVVKGK TNEQGIAKFK 600
  601 LPYGKYTYKE TIAPNGYVIN EEKFGFEIKE NGEIIKHIVK NKKEEKASFP SKPNKPTPNG 660
  661 EVKPSADVKP MQQPSTHNEV RLPATGGVGN EFTVLFVLGI SFIIAGAYVL RMKNRKEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle