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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49478225, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNIQQEKD KVKPVFYDPK GRRNIAFISF LCISIVSVSI VFYFFFQSIF STPEIPNMNT  60
   61 AVQQDNKLVP INQKLSDQQL KKEEFKPNTE AKDNKNLVNS PKDSKQRKEV YGFYVNWDEN 120
  121 STASLKENID SLTTLVPEWY HLKADLTIRS EIKPEIVKLA EKNEVKIMPL LTNYTEEASG 180
  181 PDSGLIHKLL NSSNDVKTKF INDLVKQVEK NQFAGINIDF EAVPESDREN LTNFMKELTT 240
  241 VFHKHDLLVT QDVPANDKAF DYSALAKIID RMIVMMYDEH YGAGEPGPIA SNKWFQHTLK 300
  301 ELNITSNKLI VAFGNYGYDW KVNSKEPAKS LTFSEVMAMA HNSDINIQWD KMSGNPYFRY 360
  361 KTEDNEHTAW FLDGVTLYNQ VKIAMDNNAK GFALWRLGAE DPTIWKVLKN PIEAQKNPDV 420
  421 LHKITSLDEV NYSGQGEILQ IENEKQNGLR DFKVGKDGYL TDEVYQSLPS AYEVQRYGKP 480
  481 KGKQVVLTFD DGPDPKYTPE ILDILKENKI KAAFFVLGEN AQLNPSIVKR IYDEGHEIGN 540
  541 HTFKHPNVAD TSLLRTKVEL NTTQRLIQEI TGHSTVLFRP PYEADANPDS SNEILPILRA 600
  601 QNMNYTMVAE KVDPEDWATP STNELVKRAL NPVYKGEGNI ILLHDAGGNR THTVEALPII 660
  661 IKELKKHGYS FVTISDLMNK ERDEIMPPVS SEGKQYLLYN KAVFSGAGYF KHILTTIFYI 720
  721 AIGLGIFRFL FLIYFAWKQK RKTLSRTIHS SYQPFVSVVI AAYNEEKVIA KTIRSILDSK 780
  781 YGEFEVIVVD DGSTDGTSKV MQETFYKHPK VRFIQKENGG KSSAMNLGFQ QSRGEIIVTL 840
  841 DADTIIAQDA ISLMVRHFED QNVAAVSGNV KVGNRRNLLT TWQHVEYITG FNLERRAFDE 900
  901 LNCITVVPGA IGAWRKKNVV ESGYLSEDTL AEDTDLTITF LRQGHRIVYE EKAYAFTESP 960
  961 EDVKSLIKQR YRWSYGTLQC LWKHRKALCN SKHKTLGFIA LPNMWLFQYV LQFIAPFADI1020
 1021 LMIIGLFSSN PLKVLGFYFV FFLMDLLASL FAFKLEEENP KPLVWLILQR FIYRQFMTYV1080
 1081 VVKSIFSSIR GVAVGWNKLK RVGSVEHSTE HKEAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle