YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49478151, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKTSKAKK IFGFVITAAL VTTTMVGTAN AQTTTNNYKV AGNANTVFTD VPKDHWSKDA  60
   61 IDYLAAAGLF NGYGNGKFGF GDHITRGQVT SLIARHLGLT ANNEQSNMFN DIKNHMFEKD 120
  121 IKAIVQAGIM TGDGTGAFRP DDALTRYEMA VVLKKAFQLQ SKGQSNFKDV PQDHWAYEFV 180
  181 NTLRSNRISY GDEAGNYNGN MLVKREEYAQ FLYNTIAKNR DYNFNINSKE ELKQMLTTAL 240
  241 ENGTFGPFKL NSLGKDLSDV KKEYGVPDVL KKAPCTECDA PTTAVYGDYN IDMYPSDARY 300
  301 IWVKMDISIN ELKEWFGEPD GIGEDMTSTG FIYNRGSYSL YFSFSDGYIQ RAEISKSEHH 360
  361

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	360	0.99