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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49329368, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLQTNKGA RYFMIAFIVL FLIMLLRFFY IQAVGVVHNV NVKDLATEQH NKNGVLEANR  60
   61 GTIYDQTGKV LVQDSTTYRV VVNLKGNGKL KNKDETAAQL ADALEINKED VLKNFHEGRT 120
  121 QVEIGKVGRN LSREKKEQIK KLKIPGVSFM PEKARVYPNE DFASYILGFA RPDDKGNTEG 180
  181 KFGLEKSLDK YLRSTNGNIE YVGARGGIPL TNDIGKIEPA KHGNNVYLTL DKQINSFLEE 240
  241 AMNKAQEHYD PSMLVGIIAD PKTGKVLAMS SKPSFNPNKG DIEYFLNDPI ANAYEPGSTM 300
  301 KVFTLAAAIN EGVYNGKEYF QSGKYSVGSS DIKDHNGGFG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQL 420
  421 IQAATAIAND GKMMQPYIVD KVVNPTNKQV IMENQPKEVG NPIKKETADK VRDLMERVIT 480
  481 SSKGTGTMYK VDGYPIGGKT GTAQIPNPEN GRYMEGKENY IFSFLGMAPI DDPELIVYLA 540
  541 IKQPKLEGDE YGAQPLAEIF KPVVKNSLEY LKVKPYTEKQ MADATEKSQL KVQNYVNQSM 600
  601 DTVENNVKKE KLQPITLGEG KIIKQYPQSG EVMSEGDRIF LLGKNATMPN LQGWSMRDVM 660
  661 YFSKLLKLDL KTSGTGYVTS QSIEKGQAIQ EGDVLELELE PPLQPLTEAN TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle