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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|225863028, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVKWTLLG GLATLVLAIV LYKLIVLAGG YMMDEKQLVF HSSSRIVDQK GKEITKLYVE  60
   61 NRDLVPIEQI PKYVQQAFVA VEDSRFYEHQ GIDYPSIFRA LYKDTLAGEK VEGGSTITQQ 120
  121 LAKNVFLTRE KTFTRKLKEV AISLQLEQKY TKQQILEMYM NHIYFGHGAY GIQAAAKLYF 180
  181 NKNVEDLTVE EGAMLAGLPK SPNGYSPYFS PEKSKERRDL VLSLMHKQGY LTAEESVRYQ 240
  241 GKTIALYKNL DENELAYMPY IDMVIDEAAR LYGLSHQEVL RGGYTFVVPM DEKIQKVAYN 300
  301 QFQDARNFPG KEEGAQGAFL LMDNRTGGIK AAIGGRKYVP RGFNRVFAKR QPGSVLKPLI 360
  361 VYAPALETKK YNPYSLLTNE RHSFEGYEPR NYNREYSKEI TMYDAILESA NVPAVSLLNE 420
  421 LGVEEGKQYL EKGNVHIADA GLSTALGGLK NGVSTFDLVK MYRAFLANGD IIEPHVIDKV 480
  481 LNRHGAVIGE SPKVETKIFS KQTAWYMTKM LEGVVKEGTA KAGVYSGALA GKTGTTSLPN 540
  541 DDNGARDMWF VGYTPNLVGA VWIGYDRIDK EHKLQGESAS ATKLFKKILT KANVEQKEQF 600
  601 RKPEGVETIG APIRLRKIED VKMKLAFSPF GLFKAKLSWT PLPDERIMYR IYRVENGIHT 660
  661 HVGTVNGAGE YEEKFVNIFS KPSFYVVPYN TQTNREGEKS KVAKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle