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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49476857, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPKFIKVL STLAVSTLLL SACGGNGSSD KKSSSQKNVE TNKFSSQVKN DKKEVKDGSL  60
   61 TYGLVSGTPF AGILNPVVYE NATDWDIITF FDDSLLWTDK NYEITNNGPA TFEISEDKKT 120
  121 ITIKIKDNVK WHDGNPVTAE DLEYAYLAIG HPKYEGARYS KQMPLIEGME DYHAGKADKI 180
  181 SGVKVIDQKT ISITYKQPNP SMITGVWTLP LNKKYLGDVP IEKLAGSDKV RKNPIGFGPF 240
  241 KVKKIVPGEA IEFERNDDYW AGKPKLKNLT LKVVNPSIVN ASLKNGDIDI AEVGADQYPN 300
  301 VSKLKNAQLI GKTDLYYSYI GFKFGTWDKD KKENITNENN KFKDVRLRQA MAYAIDRKEI 360
  361 GDKLYHGLRY PANSPVPPSL PKFHNNNVGA YDKDVEKAKK LLDEAGYKDK NSDGFREDPN 420
  421 GNEFKLNLLA MSGSDTSEPL AKLFIQSWKD IGVKVELVDG RLHELNSFYK MVEEDDPKVD 480
  481 LFSAAWGVGS DPDPSGVWGK NAKFNNGRWV NDQNNKLLEN GISPAAMDDK YRKDVYDKWQ 540
  541 KLIHDEVPLI PLHYKFELTG VNNRVKDYDV APGSKLTWKD VTVTSEKAEV AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle