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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85078890
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRRPTLRL FAQCRTKPQL NHTWTPRRAA SSFQSSGSAR QAFSNSRNYL TLAAAGLAVA  60
   61 TTLGYKMAVE DPIRCDSPTL AERDQQIKRE KGVNDASPMR LRMEKFVKEQ QKEIVRALEE 120
  121 ADGTPFRVDE WQRKEGGGGI TCVLQEGKVF EKAGVGVSVV YGTLPKPAII KMRANHKNLA 180
  181 QEDDIPDSLE FFAAGLSLIV HPKNPMAPTV HLNYRYFETA NPDGSSGAWW FGGGSDLTPS 240
  241 YLFDEDAIQF HKSLKEVCDA HDKEYYPRFK KWCDEYFYNK HRGECRGIGG IFFDDLDETV 300
  301 SDKENTFAFV QDALKSFAPT YISIINKRKD MPYTEEEKRW QQIRRGKYVE FNLVHDRGTA 360
  361 FGLNTPGARV ESILMSLPLT ARWEYMYEPA PKSREARLVE VLKNPKDWEE AKSSSSPLQS 420
  421 PQTSTTPALH LPTSRQFLTS LITAISNIPL LDEPPIQIHK PAPGPGSKPQ PKAADVPPAT 480
  481 EETETTIRRK QLLQILKEEG DEGKKEEEED EDDDDDDVTI RNKKNMNKIK IPAGGQANPL 540
  541 KLVPPEYRHL IITLHVLFPG VVLPGLEVLE RGLVERVILR RCAAGEGVAA ALVKEKKKKE 600
  601 EEEEEEEEEG RQKEQMKEEN MNMDVDVVME EGDDDNKKND DDDDDDDDDD DDGDVTSPPP 660
  661 AAEDETKDGG KAKKKNHHHK SLLVEEESTT EAKVEHHPRP RPPPEFYLVR SSQFLNVHPK 720
  721 RKRKYPSSNL SGLYGDAADT EGIPSGGGGG EADRERDYRI QRYMVSLEAW NCTCAAFAFA 780
  781 CVSEAEAGDD AKETGGEELQ EKRERDNKGS AGWTFGGMTL FNVGDHSSVP PVCKHLLACL 840
  841 LADKWTRALG RYVTERMVSR EEMAGIVADV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle