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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30265292, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYKVKFEHV TKKYKLYNKP FDKLKDLFFR SKDGEYHYAL NNISFEVPEG EIVGIVGLNG  60
   61 SGKSTLSNLI AGVTMPNKGT VDIKGSAALI AISSGLNGQL TGIENIELKG LMMGITKEKI 120
  121 KEIIPEIIDF ADIGKFMYQP VKTYSSGMKS RLGFAISVHI NPDILVIDEA LSVGDQTFTK 180
  181 KCLDKMNEFK EQGKTIFFIS HSLSQVKSFC TKALWLHYGQ VKEYGDIKEI VDHYDEFLKK 240
  241 YNQMSVEERK DLRKEQISQF QHGLLQEDQT GRERKRKKGK KTSRKFKKKR VLITGVCIAL 300
  301 LTGIISTGYY YKNLLPFNSE NKYAEKVASK ENVTESKQMV KKEKGAAKYI VNSNGISIRE 360
  361 EADASSKRLA IANFGDIFTI SDSNKNEKKD VEWIQITLSN GEIGWISTKF IEPFKSNNNI 420
  421 IEDAKLADVT ALLKRVYGGN MVSAPTYFGK TLNELETTYP QPLNPLPSMT GKTIVKDGNI 480
  481 QFGISQDKVV EVVFQDISMS IAKLHELLGK ESLSNDAEKN YFYETKSYYI AARSDQTHKE 540
  541 IQSISIVKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle