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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30259936, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKETLKSQFQ NVRFTVFVAL AVWLKTYLIT RTSFDLKLES FMQEFILFLS PLAASLLLVS  60
   61 LALFAKGKKR NYIALGINFV LTIILVGNVM FYGFYNDFVT LPVLGQTSNF GSLGSSVKEL 120
  121 FNYKIILAFA DIIVFFILLK KMKNFAPTER VARPMRSLYF VSTIAIFFAN LGLAEAERPE 180
  181 LLTRSFDRVM LVKNLGLYVH QVYDLGLQAK SSSQKAFADG SKLQETENYV KTTQSKPDPN 240
  241 MFGTAKGKNV IVVSLESLQT FLIGATVNGQ EVTPFLNQFT KESYYFDNFF HQTGQGKTSD 300
  301 AEFLVDTSMY PLDRGAVFFT HGNNEYTATP EILREQGYHT SVFHANNATF WNRNIMYPAL 360
  361 GYDRYYNELD YKITPETKLN WGLKDIEYFD QSIDMLKEVK QPFYTRFLTL TNHYPFTYDE 420
  421 STKLIDEYNS GDGVFDRYMV TARYLDEAMK HFIERLKAEG IYDNSIIVFY GDHYGISENH 480
  481 NRAMAQFLGK EEITAFDHMN LQKTPMFIHV PGQKEGKTIS KPTGEIDIKP TILNLLGIDS 540
  541 TNQIQFGHDV FSPENKGFVV LRDGSFVTDK YMYTNSTFYD RATGEVVQLP KEESQPLIDR 600
  601 AQNELNMSDK IIEGDLLRFS ESNKTKTGEV KTAIKEEKKS AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle