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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30265060, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKMVGKWF SFLSALIILL GIAMPQVKAE VMNRETYKMD WSYSNSKQRE IKTEIIKTAS  60
   61 GSIAYCLTPD LRSPNGEDLP EMGKTSDAVY RVLLNGYPQK GPSELGVATT EEAHYATQLA 120
  121 VWIAANELTE EDLVAKNERV HNLMKRLVEA SKKETGSQDV FFKVNPVDSQ TATQNGDYLE 180
  181 TGFYAVQTNA VSGSYTILPE NAPKGLRIVN ENGEEKSTLS INEKFKILLP KDTSSGNFKM 240
  241 KVKSTLTNLQ AIAFKGSEKV QNTTVLLQRN SEKISTDLVV NWESVGSLKI MKLGEKKEVL 300
  301 KGAVFEVSNE NFKQNVTTSD KGIAELGNLP IGIYSVKEIQ APAGYVLDRS VKKIEVKTGE 360
  361 TAVLELKNEN VKGELEITKV DVADGNTKLP NAEFTIYNEQ GKEVVKGKTD EKGVAKFKLP 420
  421 YGKYTYKETI APNGYVINEE TFAFEIKENG EIIKHIVQDK KVEGELEITK VDVADGNTKL 480
  481 PNAEFTIYNE QGKEVVKGKT NEQGIAKFKL PYGKYTYKET IAPNGYVINE EKFGFEIKEN 540
  541 GEIIKHIVKN KKEEKASFPS KPNKPTPNGE VKPSADVKPM QQPSTHNEVR LPATGGVSNQ 600
  601 FTSLFVLGIS FIIAGAYVLR MKNRKEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle