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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30259735, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSLRLKIA VVFSVLISMM FVILGTAMYQ LQKEKEVRSL DQYSQNTMDL VTEQLTAFMQ  60
   61 RIEEDMGHYG SHDDIQNMLQ DGVTLEEESF ILKEFSRFKK NHPDILDVYI GTKDKKTLSA 120
  121 NLADGGKVPE GYDPTSRQWY KASESDTKSI IWGQPQYEIA TGKLSIGVSK AIVGQDGSVL 180
  181 GVVAMDVSLG TIQKLLHNIQ YNNGGEMFIV NDKNIAIVYP EKVGKDVSKE PLLKSLNKDE 240
  241 TKFAVTTLGG KDVVAYSQLF DKMKWKIGIV YPKETIDGLL NSTRNTVIIM ACISLFVGIV 300
  301 ASYLFSRRLA RPLQLLTNHV QKVAEGDLTL QMKVTSKDEV GELTNHFNHM VEQMNEMVSK 360
  361 IKNSVSTVQR STNNLHYLTN ETVAASKEVS GAMDDVSGGA STLANSVDEV SEQLENMIQS 420
  421 VEQMNSSVGE IKGVAGKAEE ASKQGLNTMR NLVRTREQSS SIVVHTEEAS GKLEQRVGSI 480
  481 QNVVELIKGI SDQTNLLALN ASIEAARAGE QGKGFAVVAE EVRKLAEQSK EATVEIATMI 540
  541 GDVQVEVRRV VEVVSKLKDI ADIQNNVTTE AEAEFRTIMS VVNIISTSVE QIVEEVHNIG 600
  601 HEQGEITAVM HTIAGTSQES AAVSEEVNAA TESQVNHLEK VAHTMESLTE HMRDLERLVE 660
  661 QFKIEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle