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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30258893, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLKLERFR KIIGICLLVS LVFIGCFKPL RTFISSPKQL VVFEGQQSEI ASLPVFKASS  60
   61 TDRHVFTVSS NEQKQGLMVN SHQNGEADMV FQLAGFPVKK VNVRVLKDFK VIPGGQSIGV 120
  121 KLNTKGVLVV GHHLIQTEKG KVSPGETAGV QIGDMITEIN GKTIERMSDV APFIHNSGET 180
  181 GEPLNLVLLR DGKHIRTKLT PQKDNGESSY RIGLYIRDSA AGIGTMTFVH PDSMKYGALG 240
  241 HVISDNDTKK PIQVEDGQIM RSTVTSIERG SHGNPGEKLA RFSPDREVIG NITINSPFGI 300
  301 FGKLNTNMTN GVMDKAMPIA LSHQVKEGPA KILTVIDQDK VEAFDIEVVS TVPQKFPATK 360
  361 GMVIKVTDKR LLAKTGGIVQ GMSGSPIVQN GKVIGAVTHV FVNDPTSGYG VHIEWMLHEA 420
  421 GINIYDQERK AS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle