YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30258588, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDMEIGAR VTLDTQRFEN GVAGINRGLR LLDSEFNLTS ERARLLGNSV EQLQNKLAHL  60
   61 NEKFTLQGQK VEHYRQKIEQ ARQKQEQLQA SNLTLAASME RLETQYNQAV QNFGRNSQEA 120
  121 KQLKQELKQL QAEYTANGQA LQRLNTQIDN NTIAMNRAET AQARIQNEIR ETNRELAEQQ 180
  181 NRLHRTGERM RDTGNKMQDV GGQVGTTFAA MTGVIGAGLA MAVKESMNFE QKMADIQAVS 240
  241 GATGEEMKQI GDLAVTMGEK TKYSSVEAGQ GIEELIKAGV SLTEIINGGL EGALNLATAG 300
  301 ELELGEAAEI ASTALNAFKA DHLSVADAAN ILSGAANASA TDVRELKYGL SASSAVAAGA 360
  361 GMTFKDTATA LAVFAQNGLK GSDAGTSLKT MLMRLNPSTK EAYNKMRDLG LITYNAQAGF 420
  421 DFLVKNGIQP ASRNVGDIEV ALEKYVMKTE GVTKWNDKCD ATFRELATSS AFLSSKFYDQ 480
  481 QGHIQGLDKI SGLLNESMKD LTDQQRSMAL ETLFGSDAVR GATILYKEGA DGVNKMYGEM 540
  541 SKVTALEVAE TKMNTTKGKI EQLSGAVDTL KKSFGDALLP ILVDVVEGVQ GVVDWFNNLD 600
  601 ASTQQMIAKS SLLAFGIAGV TTAVGFLAMG IGALLANPVA LAITGAVLAV GALGIAIVDL 660
  661 NEKSKQAQND MDKFGQRVSE ATSKAAGAYM DLKDKAINNM MDLKLKTGEE ANKAADETIK 720
  721 AFQRMTNEVI KELEGKKSEF NKMFSQLMGA VPESAKQTLE QVKNNVIESI NKEIEVATQA 780
  781 EKILEEGIKR YQGDTLKMPK DFAQKFEQAL QVADKNVQQF YTKAKEITSI SKEIEAGGML 840
  841 SLDAGKKRFE SIIKVYEDGV KSLDKQTKGW RENVEKAFKL GEIKPEERKA TLDAIALYES 900
  901 KHVNDLQSIR NDGFKVLQQH MKEEDAEVLA SQAKRIEAED KGWGHALKPH MDFEKNQLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle