YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65321261, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRIDVLLKA FIATFGGFCG YFLGGWDATL KILVTMAVID YLTGMIAAGY NGELKSKVGF  60
   61 KGIAKKVVLF LLVGAAAQLD SALGSNSAIR EATIFFFMGN ELLSLLENAG RMGIPLPQAL 120
  121 TNAVEILGGK QKQEEKKGDV E

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	25	0.93
Non-Cytoplasmic	26	31	0.75
Transmembrane Helix	32	52	0.86
Cytoplasmic	53	66	0.75
Transmembrane Helix	67	84	0.68
Non-Cytoplasmic	85	141	0.54