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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30258533, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLDINTI LVIGSGPIVI GQAAEFDYSG TQACQSLKEE GYKVILVNSN PATIMTDTAT  60
   61 ADKVYIEPLT LEFVSRIIRK ERPDAILPTL GGQTGLNMAV ELAKSGVLEE CGVEILGTKL 120
  121 SAIEQAEDRD LFRTLMQELN EPTPPSEIIH NLDEAYGFVN EIGYPVIVRP AFTLGGTGGG 180
  181 ICHNEEELIE IVTSGLKHSP VTQCLLEKSI AGCKEIEYEV MRDSNDNAIV VCNMENIDPV 240
  241 GVHTGDSIVV APSQTLSDRE YQMLRNTSLR IIRALGIEGG CNVQLALDPY SFQYYVIEVN 300
  301 PRVSRSSALA SKATGYPIAK LAAKIAVGLT LDEIVNPVTQ KTYACFEPAL DYVVSKIPRW 360
  361 PFDKFESANR TLGTQMKATG EVMSIGRNLE ESLLKAVRSL ELGIYHLELD HLKELDKETM 420
  421 KKRIIKADDE RLFIVAEAIR QGVTKEEINE WCEMDFFFLQ KVENIVNMER EVKANVGNME 480
  481 VLQTAKEMGF SDHYIAAAWN KTEREIYDMR KENNMTPVFK MVDTCAAEFE SATPYYYSTY 540
  541 ADENELIVTD RKSVVVLGSG PIRIGQGVEF DYATVHSVWA IKEAGYEAII INNNPETVST 600
  601 DFSISDKLYF EPLTIEDVMH IIDLEKPEGV IVQFGGQTAI NLAAKLEEHG VKILGTSLED 660
  661 LDRAEDRDKF EAALTKLGIP QPVGKTATTV EQAVAIAEEI GYPVLVRPSY VLGGRAMEIV 720
  721 YRQEELLHYM KNAVKVHADH PVLIDRYMVG KEIEVDAISD GENVFIPGIM EHIERAGVHS 780
  781 GDSIGVYPPQ SLSEKLKEQI IEHTIALGKG LNIVGLLNIQ FVVFKDQVYV IEVNPRASRT 840
  841 VPFLSKITGV PMANVATKVI LGQDLVEQGY GTGYHPEEKE VYVKAPVFSF AKLRSVDTTL 900
  901 GPEMKSTGEV MGKDLTLEKA LYKGLVASGI NIPTHGSVII TVADKDKEEA MEIAKRFHEI 960
  961 GYNLLATAGT AQSLTEQNIP VQVVNKIDSE DYNLLDIIRQ GKAQFVINTL TKGKQPARDG1020
 1021 FRIRRESVEN GVACLTSLDT TRAILRVLES MTFSAHSMKE ITQTKRHEVV HA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle