YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30258499, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLAFLFPG QGSQAVGMGK QLAENNKEVA NVFAKADEVL QDSLSEVIFE GSQEKLTLTT  60
   61 NAQPALLTTS FAILTALKEY DITPDFVAGH SLGEYSALVA AGALTFEDAV YAVRKRGEYM 120
  121 EEAVPGGEGA MAAILGADPH MLKRVTEEVT GEGYAVQIAN MNSTKQIVIS GTKQGVEIAS 180
  181 QRAKENGAKR AIPLKVSGPF HSALMKPAAE KFQSVLNEIT IQDTNIPVIA NVTADVITSG 240
  241 AHIQEKLIEQ LYSPVLWYPS IEYMVNQGVD TFIEIGPGKV LAGLMKSIDS SVKAYAIYDE 300
  301 ETLKDTISNL RGEN

Type	Start	End	Confidence
Signal Peptide	1	15	0.82
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	314	0.99