YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30258324, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRSKESGLK MLDLCSGIAG ISMAADWAGI DTAAFCEIEE FNQKVLRKNY PNIPIFPDLY  60
   61 KLMKQSLIDG GVDVDSIGVI SAGYPCQGES LVGKRRGAED ERWLWPEVFR LIKELRPTWF 120
  121 VGENVAGHVT MGLDTVLSDL EEENYSTRTF VFPAVSVGAP HQRYRTFIVG HSNDKSKLQT 180
  181 DPRVVPFRSK WETWENTTGI NRGTLSGTYW EENKPAICGM DDGTATRLDE DRLRFLGNAV 240
  241 VPQQIYPIFE AIAKIEGLL

Type	Start	End	Confidence
Signal Peptide	1	24	0.49
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	259	0.99