YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49186494, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRIDVLLKI FIATFGDFCG YFLGGWDATL KILVTMAVID YLTGMIAAGY NGELKSKVGF  60
   61 KGIAKKVVLF LLVGAAAQLD SALGSNSAIR EATIFFFMGN ELLSLLENAG RMGIPLPQAL 120
  121 TNAVEILGGK QKQEEKKGDV L

Type	Start	End	Confidence
Cytoplasmic	1	6	0.78
Transmembrane Helix	7	25	0.81
Non-Cytoplasmic	26	31	0.73
Transmembrane Helix	32	52	0.82
Cytoplasmic	53	66	0.72
Transmembrane Helix	67	84	0.66
Non-Cytoplasmic	85	141	0.56