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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30258170, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTAVVAP VLAMSMALTA CSTSGGDKKT STNSSSGGDS KSEEKLAAKQ VFNKTENQEI  60
   61 PTMDTSKSTD TLGSQILGNT MEGLYRLDKE NKPIPAAAES STKSEDGKKY TFKLRKDAKW 120
  121 SNGDSVTAKD FVFAWQRLLD PKTAAEYAFI AFPIKNAEAV NKGEKPVTEL GVKAVDDLTL 180
  181 EVELEQAVPY FLNLVAFPSY YPLNEKFVKE KGDKYGLESD TTVYNGPFVL TDWKHEQGWK 240
  241 LKKNDQYWDK KTVKLDEINY SVVKEPATNV NLYDSGQIDF SLLTGEFVDK YRNNKEEYGV 300
  301 YNEPSTFFIR LNQKRGGQDT PLKSKKLREA IALSIDKKNL TNVILNDGSK PADYLVPKGL 360
  361 AAGPDGKDFQ ETFKNGVKPD AKKAAAAWEE AKKELGKDQV TIEFLNYDTG NAKKVGEYVK 420
  421 DQIEKNLKGV TVNIKLQPFK QKLKLESDQD YDISYGGWSP DYADPMTYLD MFESKHSHNQ 480
  481 MSFSDQKYDE IIKKAGGELM TDAKKRWEEL GKAEELLLEE DVALVPLYQS ARSYVMKPHV 540
  541 KGVVKHNISP EYSYKWAYVT EK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle