YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30263404, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKLFIRGI FILVSVMSVV AYLVFQGIFI PNQISADRYE IKGVDVASYQ GDIDWRELEK  60
   61 QNMKFAFIKA TEGSAFVDKY FSKNWTNANK TSMRVGAYHF FSFDSKGETQ AEQFIRNVPK 120
  121 YKQALPPVID VEFYANKKDN PPKREDVTKE LSVMIEMLEK HYGKKVILYA TQEAYDLYIK 180
  181 DAYPQCDIWI RSVLTKPSLS DERKWTFWQY TNRGKLSGYN GKEKYIDLNV FYGNEEEFEN 240
  241 YGMKD

Type	Start	End	Confidence
Cytoplasmic	1	8	0.67
Transmembrane Helix	9	29	0.76
Non-Cytoplasmic	30	245	0.99