YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30263384, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNSSNDVKT KFINDLVKQV EKNQFAGINI DFEAVPESDR ENLTNFMKEL TMVFHKHDLL  60
   61 VTQDVPANDK AFDYSALAKI IDRMIVMMYD EHYGAGEPGP IASNKWFQHT LKELNIPSNK 120
  121 LIVAFGNYGY DWKVNSKEPA KSLTFSEVMA MAHNSDINIQ WDKMSGNPYF RYKTGDKEHT 180
  181 AWFLDGVTLY NQVKIAMDNN AKGFALWRLG AEDPTIWKVL KNPIEAQKNP DVLHKITSLD 240
  241 EVNYSGQGEI LQIENEKQNG LRDFKVGKDG YLTDEVYQSL PSAYEVQRYG KPKGKQVVLT 300
  301 FDDGPDPKYT PEILDILKEN KIKAAFFVLG ENAQLNPSIV KRIYDEGHEI GNHTFKHPNV 360
  361 ADTSLLRTKV ELNTTQRLIQ EITGHSTVLF RPPYEADANP DSSNEILPIL RAQNMNYTMV 420
  421 AEKVDPEDWA TPSTNELVKR ALNPVYKGEG NIILLHDAGG NRTHTVEALP IIIKELKKHG 480
  481 YSFVTISDLM NKERDEIMPP VSSEGKQYLL YNKAVFSGAG YFKHILTTIF YIAIGLGIFR 540
  541 FLFLIYFAWK QKRKTLSRTI HSSYQPFVSV VIAAYNEEKV IAKTIRSILD SKYGEFEVIV 600
  601 VDDGSTDGTS KVMQETFYKH PKVRFIQKEN GGKSSAMNLG FQQSRGEIIV TLDADTIIAQ 660
  661 DAISLMVRHF EDQNVAAVSG NVKVGNRRNL LTTWQHVEYI TGFNLERRAF DELNCITVVP 720
  721 GAIGAWRKKN VVESGYLSED TLAEDTDLTI TFLRQGHRIV YEEKAYAFTE SPEDVKSLIK 780
  781 QRYRWSYGTL QCLWKHRKAL CNSKHKTLGF IALPNMWLFQ YVLQFIAPFA DILMIIGLFS 840
  841 SDPLKVLGFY FVFFLMDLLA SLFAFKLEEE NPKPLVWLIL QRFIYRQFMT YVVVKSIFSS 900
  901 IRGVAVGWNK LKRVGSVEHS TEHKEAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle