YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30263219, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYMAIKEIVD AANKSQKTIY ELAIEQEIEQ TKTSYEEVWS KMEQNLATMQ NAINKSIEGD  60
   61 GVFSPTGLTG GDAVKIKNYR ENRKTLSGDL MVLGIQSAIG VNEVNAALGA ICATPTAGAS 120
  121 GTIPGVLFSI KDTLQLSHED MIHFLFTSAL FGTIVANNAC ISGAYGGCQA EIGSASAMAA 180
  181 AAAVEAAGGT PQQSSEAFSI ALQNLLGLVC DPVAGLVEIP CVKRNAIGTA NALAAGDIAL 240
  241 AGVNNIINAD EVIEAMYRIG RQMPRELRET GLGGIAATPT GIAIKNKIFG EKQSNQ

Type	Start	End	Confidence
Cytoplasmic	1	103	0.55
Transmembrane Helix	104	119	0.45
Non-Cytoplasmic	120	296	0.59