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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30257780, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKLSGVLA ATLALTMSLP TGAIASSSSK TPVVSSQEVA SKDLEKIAAE NAALLTKSYE  60
   61 TTSVQYALID NGKLILSGQT GKNDIEGKEP LTKDTLYGIG STSKVYTAAA VMKLVDEGKV 120
  121 DLDASVTRYI PEFKMKDERY KRITPRMLLN HSSGLQGSTL NNAFLFKDND VYAHDILLQQ 180
  181 LSNQNLKADP GAFSVYCNDG FTLAEILVER VSGMSFTEFL HQKFTEPLKL NHTITSQDKW 240
  241 EDEKRAGQYS PTYQGQLPSE MVNVIGTGGI SSTAEDVVRF SQIFMGQGKE ILSNKAVKAM 300
  301 EQEEYKKGMW PGDSGNVFNY GLGWDSVKLY PFSEYGIKAL TKGGDTMLQH ATLVVLPEQK 360
  361 MAAAVLSSGG SSMTNQLLAN KLLLARLKEK GTIKDIKPDR SFGKPVKAKV PQDVVKKAGF 420
  421 YGNSYSHFKI EITKKGELFL PTKPEEKYVY TADGSFINEK GTSKLNFVTE KNGKVYLRES 480
  481 AYELSPGLGQ NVLTHYLAQK LENNVLPKKT AAAWAKREGG KFYLVNEKFN SINYLGQQIP 540
  541 LNTQITLKDG YWDGKKITGP NTATHQIQIP VMNGRDTKEA HFYTEDGTEY MEMSSFLYVS 600
  601 ESNVKSLDTG QLSKVTLQKS GHAKWFTIPQ EAAGKTMNVE LPSGSSFAVY DENGVCVNFS 660
  661 VVSNNNKVKL PENGTVVFAG APNSEFTVAL N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle