YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30263081, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKILLLATG GTIASVEGNE GLAPGLSAEE LLNYFSRSSR NLEIDCKILM NIDSTNMQPE  60
   61 HWKEIANAVF NHYDDYDGFV ITHGTDTLAY TSSALSYMLQ GLRKPVVLTG SQVPISFKKT 120
  121 DAKKNVADAL RFACEDVGGV FIVFDSRVII GTRAVKMRTK SYDAFESVNY PYVAEVNEDE 180
  181 VKYHWKPTSS HNQLSINTNL CTDVFLMKLY PGTKPEIFDC LKDLYKGIII ESFGNGGLPF 240
  241 EGRNLLSKIQ ELTEMGVAVV ITTQCLEEGE DILLYEVGRK VAQHQVILSG DMNTEAIIAK 300
  301 LMWALGKTNK LEEIKKIIEE PLSYDLTIKS DKDW

Type	Start	End	Confidence
Signal Peptide	1	18	0.97
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	334	0.99