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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30262956, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELALKMKR LLLVGTIILS MLCTESLMNY HTAEAKVKKV ERKPKNVIIM VMDGTSSTAT  60
   61 TLARLYKGKP LALDEIVTGG VRTYSAESAI TDSAPAATAL ATGNKSNSGY VGVLPSIVSS 120
  121 SGLKPMKEED KLRPVANVLE GAKRTGRATG IVATAEIQHA TPAGFSAHHV NRNNFEVLAE 180
  181 QQVYQNIDVV LGGGKAALLP ETDSGIRKDG EDLVKVIKNK GYDFVETKEA LLGSKSNKIW 240
  241 GSFSLNALAF DMDREATNPE QPTLSQMTEK AIQTLSKDKD GFFLFVEGSK PDWAAHVNDP 300
  301 IGMISDVLAF DNAVAEALKF AKKDGNTMLI AVADHGNSGI SIGNMNTTKG YNTTPISAYI 360
  361 YPLKKAKMTL EGTINNLKAD ISNVEEVAKL YGLDNLTYDE KERLKTAKKK IDVGPIFTTL 420
  421 LSKRANIGFT TGGHTGEDVF LYSYGPQKPY GLIQNTDVAK TMAKAMGFNL EKVTNKLFVE 480
  481 SESAIKQNDA AVTIDKTDVA NPVLIVKRNN VTAQLFVNKN IIRIKNKEYE LGSVVVESNG 540
  541 KVYVPEEAIH LFRKHSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle