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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30256586, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGIAYWIEK RAYLHPDRIA IITEEEEMTY KQLHEYVSKV AAYLIYELNV KKGERIAILS  60
   61 QNSLEYIVLF FAIAKVECIA VPLNIRLTEN ELIFQLKDSG TTVLFVEKTF QNMALSMQKV 120
  121 SYVQRVISIT SLKEIEDRKI DNFVEKNESA SFIICYTSGT TGKPKGAVLT QENMFWNALN 180
  181 NTFAIDLTMH DRSIVLLPLF HIGGIGLFAF PTLFAGGVII VPRKFEPTKA LSMIEKHKVT 240
  241 VVMGVPTIHQ ALINCSKFET TNLQSVRWFY NGGAPCPEEL MREFIDRGFL FGQGFGMTET 300
  301 SPTVFMLSEE DARRKVGSIG KPVLFCDYEL IDENKNKVEV GEVGELLIRG PNVMKEYWNR 360
  361 PDATEETIQD GWLCTGDLAR VDEDGFVYIV GRKKEMIISG GENIYPLEVE QVINKLSDVY 420
  421 EVAVVGRQHV KWGEIPIAFI VKKSSSVLIE KDVIEHCRLF LAKYKIPKEI VFLKELPKNA 480
  481 TGKIQKAQLV NQLKSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle