YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261878, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKIIITIV TLFIITVALF GTYKLMNARG FQLFGDLTNR VETNEKVVAL TFDDGPTNNV  60
   61 KQILPLLDTY HAKATFFLIG NELEKNLSLG EAIVQSGHQV GNHTYSHNRM VFKTPSYIKE 120
  121 EIEKTNSLIR RIGFTGEIDF RPPNGKKLIG LPYYLNKNNI ETITWDLEPD TFYKSAADKI 180
  181 DYVSKNVKPG SIILLHSMYD ESNENLQTIE GILDSLSKKG YQFVTVNELQ KSAK

Type	Start	End	Confidence
Signal Peptide	1	21	0.55
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	234	0.96