YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30255908, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQEISMKDF QQLLKRRIVT IILTMCCLTV SLILISMYVL KPSYQYSTQI LVGNLDEFNK  60
   61 ENSTNKTQEN KQLVTSYVDI LKSPLIISTV KKTLKLEQSS HELVQKISVV NMDNSQIVTV 120
  121 TAKDSDPIIV KEIVKSLAEQ SQKSFQQYTN VQGVKILTDP ELQEKAEKLF PKFQLIIPIS 180
  181 VIVSFFVGIG LAVFRDYFDE RIYVEQDLEK ITTVPVIGHI NMEPKRKKES TEVDPQSAIY 240
  241 RGEHVDV

Type	Start	End	Confidence
Cytoplasmic	1	17	0.96
Transmembrane Helix	18	40	0.92
Non-Cytoplasmic	41	174	0.97
Transmembrane Helix	175	194	0.71
Cytoplasmic	195	247	0.71