YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261589, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKETAIIIG GGPCGLAAAI SLQKVGINPL VIEKGNIVNA IYNYPTHQTF FSSSEKLEIG  60
   61 DVAFITENRK PVRNQALAYY REVVKRKSVR VNAFERVEKV QKDGEVFQVE TTKRDGSKEI 120
  121 YIAKYIVVAT EYYDNPNYMN VPGEELKKVA HYFKEGHPYF DRDVVVIGGK NSSVDAALEL 180
  181 VKAGARVTVL YRGSEYSPSI KPWILPEFEA LVRNGTIQMH FGAHVKEITE HTLTYTVDGE 240
  241 ANTIQNDFVF AMTGYHPDHS FLTKMGVRID EATGRPIYAE DTMETNAANI FIAGVIAAGN 300
  301 NANEIFIENG RFHGDAIAQT IATREI

Type	Start	End	Confidence
Signal Peptide	1	17	0.51
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	326	0.98