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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30255427, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWRSVVGKL WMTILLLVSF VLGFVAILLS QFFRTYYVDM SEARLQKVAT SVSELIEEGA  60
   61 DVKTIENIAY KFSDPLSRII IVEEGKEISS SPKQEGLVTL TIDDLKEDKE LAAVFTDKKE 120
  121 IKNKVRKASN SRKNKNTEND IMIVGKPVQS KNESAVFVYE SLQVPIQGME RTTDFIFLSA 180
  181 GIAIILTTFF AFFLSTRITA PLRKMREVAF EVSRGKFDAK APMVSQDEIG ELATALNQMG 240
  241 KQLKFNMNAL QQEKEQLASI LSSMADGVIT LNQEGEVVVI NPPAEHFLQV WQEEKEIELS 300
  301 KKLPSELVEL FHLVVESEQQ QVVGINLQKG NYVVLMTPLY NQTKIRGAVA VLRDMTEERR 360
  361 LEKMRQDFIA NVSHELRTPM VMLQGYSEAI LDDIVQTKEE INEFVQIIYD ESVRLGKLVN 420
  421 ELLDLARMES GNVELHIGEV DIHPFVEKIG RKFQGIAKDK EVALTVDFKD SIEQYPFDAD 480
  481 RMEQVLTNLI DNAIRHTNAG GHVTLVIDTK NNGLIFEVQD SGAGIPEEDI PFLFDRFYKA 540
  541 DKARTRGKKG GTGLGLAIAK NIVQGHGGKI SVSSVVGEGT TFSVYLPNRI I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle