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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30261570, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEIKCECG HVNPIGTVFC EACGKPFESN ENIKLLDMRY EGSARRSLTQ TKTIVDKIWS  60
   61 FFSSVKVGVW LIVITLAASA IGTIFPQEMY ITPGIAPAEY YKQEYGFLGQ LYYQLGFNNL 120
  121 YGSWWYMILI ASIGISLVIC SLDRVIPLYK ALKKQGVKRH PSFLKRQRLY GTGAPQDGDL 180
  181 ERVQKNLKKV NYNVKVEDGN ILAEKGRFSR WGPYVNHIGL IIFLFGAMLR FLPSMYVDEA 240
  241 LWLRDGETKE IPGTDGQYYL KNEKFIKEVY DKSKDKEVFD EAIDRVGDKM IAKNFQTNAI 300
  301 LYKAIGENIA GEKPKLEKVK EAEIRVNEPL KFDQFAVYQV DYKESEFKSM SFNLQNKENN 360
  361 QKWGPIKVDL TNPIEKYDLG NGYSLELLNY FPDFYFDENG RPNTKTKLPN NPAFVFKMFT 420
  421 PETPDGEVSF VGIQQNIEAD GNNKYKMSFA GVEMQNATAL TVRKDLTLWI LGIGGFIFMV 480
  481 GVIQGMYWNH RRIWIQRVND EWWIAGHTNK NWFGLKKDIE RVLEGTAIPQ PNDKVVDKKI 540
  541 S

YRC Informatics Platform - Version 3.0
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