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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30255405, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKNTHLKK MQEWFNKRKK LRNLLIILGS LLATLFIAIN IIISIQDISE LKQAVPQPTL  60
   61 IYDANNEVAT KLASSKTEGV KRKDIPDIMV QAIVAVEDKE FFNHHGIYYS GIISAIFKNI 120
  121 TAGEVVAGGS TITQQLAKNV FLTQDRTYSR KIKEYFLTKK IERTYTKDEI IEMYMNQIYF 180
  181 GEGAWGIKRA AKSYFDKDVK DLTISEAATI AGLIKAPSAY SPYKNFNKSI ERRNVVLSLM 240
  241 KEQGYISDEQ YNKEKESGLV LKRGVDDKYK GKYSQYVDYI VREAMDKYEL TQNEILAGGY 300
  301 RIYTELDPKK QQAVEDVVNN DSYFKDSGSD QLMQTGVVLM NPTTGGVPAL VGGRGPYQFL 360
  361 QFNHATQLKR QPGSTLKPLA VYVPALEQGY EVYDILKDEP FNIKEYKPQN SDHTFHGDVT 420
  421 MYEAVAKSYN VSAVWLLEQI GLDKGLKSLE RFGIPLVPED RTYPIALGGM HVGTSPFVMA 480
  481 QAYSTFANDG VQVEAHAIRE IQNAEGETIG KWYKKETRVT SEKISQKMTY LLKGVVEKGT 540
  541 GEKAKVTNVD TAGKTGTTQI VNGPSTGAKD SWFVGYTPDL VGAIWVGYDK TDSDHYVPGG 600
  601 SQITTTMFRD IMKKANANPA QKAFQLSLIS EADYKKQLTT IEEEKRRKEE EQQRKQEQQE 660
  661 WLDKVKEWIP SFW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle