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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30261515, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRLFPKLR FALVAVVLLW IKTYIVYKLA FDIKIDNFFE EFMLFMNPLA ALLLFFGFAL  60
   61 FASKHRNRII VGISFILSFI LFGNAMFYGF YNDFVTFPVL FQTNNMADLG TSIKELFTYK 120
  121 TLLLFADAII LMFLSRKFPA FCDKTPLSRS EKRTFFSSVT ALLALQIVVS VIYKPQMFSR 180
  181 SFDRQTVVKN LGLYTYHLFD ITLQSKSSAE RVFASGDGFS EIKNYTDSKD KQVDKNLFGA 240
  241 AKGKNVILIS MESTQSFVIN KKINGKEITP FLNEFIKDSF YFDNFYHQTG QGKTSDAEFI 300
  301 VENSLYPLDR GSVFFTHATN EYTATPEQLK KYGYSSAVFH SNDKAFWNRD VMYPALGYDR 360
  361 YFNLNDYVGT EQMSVGWGLK DKEFFEQSIP KLKSLPQPFY TKFITLTNHF PFLLNPEDQY 420
  421 VDEFNSESGV VNRYFPTVRY TDEALKQFIK QLKAEGLYDN SVIVIYGDHY GISENHNAAM 480
  481 AQFLGKDAIT PFDSMQLQRV PLIIHVPGQE GKVISKVSGQ IDIKPTLLHL LGIKTNKSVE 540
  541 FGTDLFIKEE DPLMVMRDGS FVSEDYVYTK NMCYKRSTGE EADISLCQPN IEKAKTELKL 600
  601 SDKLIYGDLL RFDPTNQYKT GTMTTKFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle