YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30255261, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTYVYALLV GMVFGSFFML IAMRIPLGES IIIPRSHCHY CKYVLKPKEL IPIISFCIQR  60
   61 GRCTNCKRKI SILYVIFELV TGIICLLTVY MIGVERELII ILSLFSLLLI ISVTDYIYML 120
  121 IPNRILAWFS CLLILECVFV PLVTWTESIV GSGVIFILLY CMQKIYPEGL GGGDIKLLSL 180
  181 LGFIAGLKGV FMILFLSSFF SLCFFGAGLV LKRMKMRTQI PFGPFISLGA ICYMLVTYAK 240
  241

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.89
Transmembrane Helix	6	27	0.93
Cytoplasmic	28	69	0.99
Transmembrane Helix	70	92	0.94
Non-Cytoplasmic	93	97	0.88
Transmembrane Helix	98	118	0.95
Cytoplasmic	119	125	0.80
Transmembrane Helix	126	146	0.84
Non-Cytoplasmic	147	188	0.77
Transmembrane Helix	189	211	0.89
Cytoplasmic	212	219	0.83
Transmembrane Helix	220	239	0.88
Non-Cytoplasmic	240	240	0.91