YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30260850, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQNNNQANG HAHSGFPWSH VFGFILSLAL TFLALYVALY TNLPLSTILT TIIAMAVAQA  60
   61 LLQLIMFMHL KEGEGRVQIL TMIYSFFVAT ATVGLTVWIF FSM

Type	Start	End	Confidence
Cytoplasmic	1	17	0.80
Transmembrane Helix	18	40	0.90
Non-Cytoplasmic	41	46	0.69
Transmembrane Helix	47	67	0.94
Cytoplasmic	68	79	0.69
Transmembrane Helix	80	101	0.94
Non-Cytoplasmic	102	103	0.73