YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30254276, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKVLALAA AITLVAPLQN VAFAHENDGG SKIKIVHRWS AEDKHKEGVN SHLWIVNRAI  60
   61 DIMSRNTTLV KQDRVAQLNE WRTELENGIY AADYENPYYD NSTFASHFYD PDNGKTYIPF 120
  121 AKQAKETGAK YFKLAGESYK NKDMKQAFFY LGLSLHYLGD VNQPMHAANF TNLSYPQGFH 180
  181 SKYENFVDTI KDNHKVTDGN GYWNWKGTNP EDWIHGAAVV AKQDYSGIVN DNTKDWFVKA 240
  241 AVSQEYADKW RAEVTPMTGK RLMDAQRVTA GYIQLWFDTY GDR

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	283	0.99