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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30260822, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKAPLKVL SSLAIAAIIG CTSVMSAPLA YAETPAKEKE NVSTTPIDYN LIQEDRLAEA  60
   61 LKERGTINPA SSKEETKKAV EKYIEKKQGD QANKEILPAD TAKEASDFVK KVKEKKMEEK 120
  121 EKVKKPEKNV SPEQKPEPNK KQLNGQVPTS KAKQAPYKGS VRTDKVLVLL VEFSDYKHNN 180
  181 IDQTPGYMYS NDFSREHYQK MLFGNEPYTL FDGSKVKTFK QYYEEQSGGS YTTDGYVTEW 240
  241 LTVPGKASDY GADGSSGHDN KGPKGARDLV KEALHAAAEK GLDLSQFDQF DRYDTNSDGN 300
  301 QNEPDGVIDH LMVIHAGVGQ EAGGGKLGDD AIWSHRSKLA IDPVAIEGTK SKVDYFGGKV 360
  361 AAHDYTIEPE DGAVGVFAHE FGHDLGLPDE YDTKYTGTGS PVEAWSLMSG GSWTGKIAGT 420
  421 EPTSFSPQNK DFLQKNMGGN WAKILEVDYD KIKRGVGVPT YIDQSVTKSN RPGVVRVNLP 480
  481 GKSVETIKPE FGKHAYYSTR GDDMHTTLET PFFDLTKGTN AKFDYKANYE LEAECDFVEV 540
  541 HAVTEDGTKT LIDRLGEKVV QGDKDTTDGK WIDKSYDLSQ FKGKKVKLQF DYITDPAVTY 600
  601 KGFAMDHVNV TVDGQVVFSD DAEGQSKMNL NGFVVSDGTE KKAHYYYLEW RNYAGSDNGL 660
  661 KAGKGPVYNT GLVVWYADDS FKDNWVGVHP GEGFLGVVDS HPEAFVGNLN GKPTYGNTGM 720
  721 QIADAAFSFD QTPAWSVNSL TRGQFNYSGL QGVTTFDDSK VYSNNQIADA GRKVPKLGLK 780
  781 FQVVGQADDK SAGAVWIKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle